scSemiProfiler.utils.visualize_recon

scSemiProfiler.utils.visualize_recon(name, representative, save=None)[source]

Visualize the performance of reconstruction by plotting the original and reconstructed data in the same UMAP.

Parameters

  • name (str) – Project name

  • representative (typing.Union[int, str]) – Representative sample ID (string or int)

  • save – Path within the ‘figures’ folder to save the plot

Return type

None

Returns

None

Example

>>> name = 'project name'
>>> visualize_recon(name, 6)