Index

A

activeselection() (in module scSemiProfiler.representative_selection)

assemble_cohort() (in module scSemiProfiler.utils) assemble_representatives() (in module scSemiProfiler.utils)

C

celltype_proportion() (in module scSemiProfiler.utils) celltype_signature_comparison() (in module scSemiProfiler.utils) comb() (in module scSemiProfiler.utils)

compare_adata_umaps() (in module scSemiProfiler.utils) compare_umaps() (in module scSemiProfiler.utils) composition_by_group() (in module scSemiProfiler.utils)

E

enrichment_comparison() (in module scSemiProfiler.utils)

errorcurve() (in module scSemiProfiler.utils) estimate_cost() (in module scSemiProfiler.utils)

F

faiss_knn() (in module scSemiProfiler.utils)

G

geneset_pattern() (in module scSemiProfiler.utils) get_eg_representatives() (in module scSemiProfiler.get_eg_representatives)

get_error() (in module scSemiProfiler.utils) global_stop_checking() (in module scSemiProfiler.utils)

H

hyperp() (in module scSemiProfiler.utils)

hypert() (in module scSemiProfiler.utils)

I

initsetup() (in module scSemiProfiler.initial_setup)

inspect_data() (in module scSemiProfiler.utils)

L

loss_curve() (in module scSemiProfiler.utils)

M

module scSemiProfiler.get_eg_representatives scSemiProfiler.inference scSemiProfiler.initial_setup scSemiProfiler.representative_selection scSemiProfiler.singlecell_process scSemiProfiler.utils, [1], [2]

R

rrho() (in module scSemiProfiler.utils)

S

scinfer() (in module scSemiProfiler.inference) scprocess() (in module scSemiProfiler.singlecell_process) scSemiProfiler.get_eg_representatives module scSemiProfiler.inference module scSemiProfiler.initial_setup module

scSemiProfiler.representative_selection module scSemiProfiler.singlecell_process module scSemiProfiler.utils module, [1], [2]

T

tgtinfer() (in module scSemiProfiler.inference)

V

visualize_inferred() (in module scSemiProfiler.utils)

visualize_recon() (in module scSemiProfiler.utils)